Version and information to download can be found here. To install the development version you may need to install the Biostrings and seqLogo package from bioconductor first: if (!requireNamespace("BiocManager", quietly = TRUE))īiocManager::install(c("Biostrings", "seqLogo"))Īlso the development version usually depends on the latest ape development Alternatively, wait a few days until CRAN publishes the binaries for igraph right now the source is already at 1.2.8 while the binaries are 1.2.7 so R probably opts for compiling from source. the latest development version remotes::install_github("KlausVigo/phangorn") Try installing gfortran first before trying to compile and install igraph from source - I believe this should do the trick.the latest released version install.packages("phangorn").Furthermore, phangorn offers several functions for comparing trees, phylogenetic models or splits, simulating character data and performing congruence analyses. Extending the general ML framework, this package provides the possibility of estimating mixture and partition models. phangorn offers the possibility of reconstructing phylogenies with distance based methods, maximum parsimony or maximum likelihood (ML) and performing Hadamard conjugation. Phangorn is a package for phylogenetic reconstruction and analysis in the R language.
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